Table 1
SNPs included in the SNPlex genotyping panel

Candidate gene Marker Location (BTA:bp) Call rate MAF HWEp-value
ARL4A rs43375517 4:20296999 98.1 0.39 0.14
ETV1 rs42213673 4:22111819 98.8 0.35 0.28
SNX13 rs41595314 4:26425057 98.6 0.07 8.10− 3
LEP rs29004488 4:93262056 97.4 0.33 0.02
OLR1 rs109019599 5:100254823 89.3 0.25 2.10−3
ABCG2 rs43702337 6:38027010 99.7 0.00 1.00
OPN rs132812135 6:38120968 94.5 0.35 0.55
rs110930453 6:38122665 93.1 0.42 0.87
OPN3907a 6:38128806
PPARGC1A rs109579682 6:44875251 98.4 0.23 0.03
rs133669403 6:44875315 97.5 0.08 0.09
rs17870811 6:44875421 99.5 0.06 0.46
CSN1S1 CSN1_AB 6:87146017 87.9 0.00 1.00
rs433385179 6:87148464 99.9 0.00 1.00
rs43703010 6:87157262 96.8 0.15 0.64
CSN2 rs43703013 6:87181453 96.8 0.04 0.02
rs43703011 6:87181619 97.6 0.27 0.01
CSN3 rs43706475 6:87390479 99.3 0.00 1.00
rs43703015 6:87390576 99.4 0.19 0.33
rs43703017 6:87390632 98.2 0.04 0.33
LGB rs41255680 11:103301242
rs41255685 11:103301690 75.3 0.08 < 1.10−6
rs43691049 11:103303343
rs109625649 11:103304757 83.5 0.10 0.56
DGAT1 rs109234250 14:1802265 62.8 0.10 0.61
rs109326954 14:1802266 62.8 0.10 0.61
STAT5A rs109487069 19:43047829
GH rs109191047 19:48768766 97.5 0.19 0.19
rs137651874 19:48769040 98.1 0.48 0.10
FASN rs208645216 19:51400139
rs41919985 19:51402032 78.7 0.15 2.10−3
GHR rs385640152 20:31909478 98.8 0.09 0.84
PRLR rs135164815 20:39115344 99.2 0.15 0.91
UTMP rs132991801 21:59667572 96.0 0.42 0.03
LTF rs41256920 22:53521978 99.2 0.23 0.39
rs43706485 22:53522038 95.5 0.19 0.93
PRL rs211032652 23:35106206 99.5 0.08 0.57
rs110494133 23:35110974 97.4 0.21 3.10−6
SCD1 rs41255693 26:21144708 98.9 0.19 0.17