Table 5. Significant haplotype effect of polymorphisms in RGS16 on the PCV2 viral load in 142 Yorkshire pigs
Combination | Significant trait | Haplotype |
Absent | 1 copy | 2 copies | p-value |
No. | LSM ± SE | No. | LSM ± SE | No. | LSM ± SE |
Haplo1 (GTA) | Viral load | 23 | 2.99 ± 0.39ab | 94 | 3.43 ± 0.19a | 25 | 2.36 ± 0.39b | 0.04 |
Haplo4 (GCT) | Viral load | 110 | 3.20 ± 0.20 | 32 | 3.34 ± 0.35 | 0 | N/A | 0.71 |
Haplo6 (ACT) | Viral load | 55 | 2.75 ± 0.26b | 73 | 3.64 ± 0.22a | 14 | 2.57 ± 0.49b | 0.01 |
Means with different superscript letters are significantly different (p < 0.05).
PCV2, porcine circovirus type 2; LSM, least squares mean.