Table 5. Chi-squared and Hardy-Weinberg equilibrium testing of SNP-type distributions for SNPs of the C147T
SNPs | No. | Genotype frequency | Allele frequency | χ2 1) | Diversity parameter |
CC | CT | TT | C | T | Ho | He | PIC |
C147T | 31 | 0.903 | 0.097 | 0 | 0.952 | 0.048 | ND | 0.097 | 0.094 | 0.088 |
Degrees of freedom: 1.
SNP, single nucleotide polymorphism; ND, not done; Ho, observed heterozygosity; He, expected heterozygosity; PI, polymorphic information content.