Table 6. RNA-seq reads and mapping rate of the small intestine samples
Sample ID | Read Order | Yield (bases) | # Reads | Passed Trimmomatic | Overall alignment rate |
63-F | 1 | 60,927,940 | 15,231,985 | 14,493,162 (95.15%) | 97.57% |
2 | 60,927,940 | 15,231,985 | 14,493,162 (95.15%) |
64-F | 1 | 70,527,820 | 17,631,955 | 16,823,411 (95.41%) | 96.92% |
2 | 70,527,820 | 17,631,955 | 16,823,411 (95.41%) |
65-F | 1 | 67,515,972 | 16,878,993 | 16,128,617 (95.55%) | 96.98% |
2 | 67,515,972 | 16,878,993 | 16,128,617 (95.55%) |
69-F | 1 | 59,891,304 | 14,972,826 | 13,599,210 (90.83%) | 97.03% |
2 | 59,891,304 | 14,972,826 | 13,599,210 (90.83%) |
70-F | 1 | 71,564,156 | 17,891,039 | 17,002,853 (95.04%) | 96.85% |
2 | 71,564,156 | 17,891,039 | 17,002,853 (95.04%) |
81-F | 1 | 67,917,992 | 16,979,498 | 16,243,632 (95.67%) | 97.37% |
2 | 67,917,992 | 16,979,498 | 16,243,632 (95.67%) |