Table 2. Selection regions and genes identified from Heugu and Hanwoo cattle comparison

Chr Start position End position Candidate genes QTL
2 71023597 71882569 MARCO, STEAP3, C2H2orf76, DBI, SCTR Body weight
3 8684364 8879299 ITLN2, ENSBTAG0000046236, ENSBTAG00000040437, CD244, LY9, ENSBTAG00000010458 Marbling score
5 100367546 101298140 CLEC12B, KLRF2, RF00026, ENSBTAG00000038461, A2M Scrotal circumference, yearling weight
7 54109476 54190447 PCDHGA2, PCDHGA3, PCDHGB1, PCDHGB2, PCDHGA5, PCDHGC3
8 60317329 60596717 GBA2, MSMP, RGP1, NPR2, ENSBTAG00000047598, SPAG8, HNT2, FMA221B, TMEM8B, ENSBTAG00000026123 Height, body weight
8 67030265 67241125 ENSBTAG00000005966, ENSBTAG00000005966 Body weight gain
8 72477349 72949048 ADAM28, ADAMDEC1, ADAM7
11 34583714 34813659 -
11 93787137 93853093 OR1L1, OR1L3
15 47043175 47908687 DCHS1, TPP1, TAF10, RRP8, DNHD1, APBB1, OR52E4, ENAG00000037505, ENSBTAG0000000118, ENSBTAG00000038452, ENSBTAG00000027949, ENSBTAG00000040480, ENSBTAG00000036326 Body weight gain, yearling weight, average daily gain, feed conversion ratio, dry matter intake, residual feed intake
17 72962185 73021410 IGLL1, ZNF280B, ZNF280A
18 6301968 6481097 -
18 11406268 11581262 -
18 13933911 14685758 CYBA, RNF166, CTU2, PIEZO1, bta-mir-2327, CDT1, APRT, GALNS, TRAPPC2L, CBFA2T3, ACSF3, CDH15, SLC22A31, ANKRD11, SPG7, CPNE7, ZNF276, FANCA Residual feed intake, calf size
21 49597943 49738155 TRAPPC6B, ENSBTAG00000045986, ENSBTAG0000006819 Bone quality
24 41976143 42597651 RALBP1, RAB31, TXNDC2, VAPA, APCDD1 Average daily gain, age at puberty
chr, chromosome; QTL, quantitative trait locus.