Table 3. Differentially expressed miRNAs identified by miRDeep2 in liver between divergent feed efficiency pigs

Mature SSC ID Ref miRNA FC(H/L) p-value Mature sequence
ssc-miR-10386 −5.86 >1.05E-41 gucguccucucccucccuccu
ssc-miR-26b-5p hsa-miR-26a-5p 1.04 2.41E-05 uucaaguaauucaggauagguu
ssc-miR-1839-5p −1.61 6.92E-05 aagguagauagaacaggucuug
ssc-miR-155-5p hsa-miR-155-5p 1.15 0.000556 uuaaugcuaauugugauagggg
ssc-miR-454 hsa-miR-130a-3p 1.57 0.00074 uagugcaauauugcuuauagggu
ssc-miR-455-5p hsa-miR-455-5p 1.02 0.003295 uaugugccuuuggacuacaucg
ssc-miR-185 hsa-miR-185-5p −1.07 0.016294 uggagagaaaggcaguuccuga
ssc-miR-193a-5p hsa-miR-193a-5p −1.17 0.020914 ugggucuuugcgggcgagauga
ssc-miR-24-2-5p hsa-miR-24-3p 1.00 0.021422 gugccuacugagcugauaucagu
ssc-miR-29a-5p hsa-miR-29a-3p 2.16 0.021715 acugauuucuuuugguguucag
ssc-miR-16 hsa-miR-15a-5p 1.11 0.027376 uagcagcacguaaauauuggcg
ssc-miR-125b hsa-miR-125b-5p −1.03 0.032728 ucccugagacccuaacuuguga
ssc-miR-135 hsa-miR-135a-5p 1.35 0.037177 uauggcuuuuuauuccuauguga
ssc-miR-96-5p hsa-miR-96-5p 1.27 0.04017 uuuggcacuagcacauuuuugcu
SSC, sus scrofa chromosome; FC, log2(Fold Change) level.