Table 2. Result of DADA2 statistics of 16s rRNA amplicon sequencing variants on the gut-microbiota in dogs after feeding diets with Hericium erinaceus
Sample-id | Group | Input | Filtered | Denoise | Merged | Non-chimeric |
C2-1 | CON | 92526 | 80625 | 79394 | 74900 | 53305 |
C2-2 | CON | 106559 | 93358 | 92727 | 83277 | 58403 |
C2-3 | CON | 108517 | 95954 | 94368 | 89609 | 67646 |
C2-4 | CON | 109942 | 96474 | 93438 | 86881 | 65839 |
C2-5 | CON | 107238 | 96234 | 94123 | 87696 | 64505 |
C2-6 | CON | 111296 | 98599 | 96432 | 89855 | 66081 |
T1-1 | HE-L | 112033 | 98977 | 97648 | 92921 | 59231 |
T1-2 | HE-L | 97660 | 86009 | 83711 | 77688 | 54637 |
T1-3 | HE-L | 96495 | 84262 | 82119 | 76035 | 56370 |
T1-4 | HE-L | 106150 | 93839 | 91346 | 84423 | 63920 |
T1-5 | HE-L | 105953 | 93036 | 91595 | 87238 | 64976 |
T1-6 | HE-L | 106342 | 93807 | 91513 | 85083 | 61415 |
T2-1 | HE-H | 101852 | 90557 | 89064 | 84894 | 64756 |
T2-2 | HE-H | 98872 | 86882 | 84837 | 78323 | 56512 |
T2-3 | HE-H | 90928 | 80589 | 78647 | 72837 | 54716 |
T2-4 | HE-H | 87720 | 77559 | 76119 | 70781 | 49704 |
T2-5 | HE-H | 97913 | 86257 | 84582 | 80179 | 64768 |
T2-6 | HE-H | 100987 | 88649 | 87616 | 83072 | 58996 |
Number of non-chimeric reads were used for investigation of gut-microbiota after filtered out by DADA2.
CON; group fed with a diet without Hericium erinaceus, HE-L; group fed with a diet of 0.4 g Hericium erinaceus, HE-H; group fed with a diet of 0.8 g Hericium erinaceus; n = 6 per group.