Table 4. Information of ROH island regions and annotated genes in YO population

Chromosome No. SNPs Physical position (bp) Length (bp) Gene symbol No. genes
3 265 32,927,377 - 33,454,824 527,447 - -
4 240 14,268,782 - 14,785,480 516,698 GAB3, SMARCA1 2
443 64,170,233 - 65,011,778 841,545 SGCZ, DLC1, TRMT9B, LONRF1, PAICS, PPAT, AASDH, CRACD, CEP135, EXOC1, EXOC1L 11
5 291 2,135,723 - 3,492,810 1,357,087 NAV2, PRMT3, LEUTX, SLC6A5, NELL1, ANO5, SLC17A6, FANCF, GAS2, SVIP, ANO3 11
289 28,913,241 - 29,409,863 496,622 RAD51B, TMEM229B, PLEKHH1, PIGH, ARG2, VTI1B, ZFYVE26, PLEK2, EIF2S1, ATP6V1D, MPP5, GPHN 12
198 29,489,091 - 29,849,491 360,400 GPHN, BMF, SRP14, EIF2AK4, GPR176, FSIP1, THBS1 7
231 30,415,825 - 30,786,010 370,185 RYR3, FMN1, GREM1 3
57 30,886,135 - 31,013,813 127,678 RASGRP1, FAM98B, SPRED1 3
36 31,045,059 - 31,144,065 99,006 - -
145 48,848,363 - 49,162,160 313,797 DLK1, BEGAIN, WDR25 3
2 49,320,624 - 49,326,092 5,468 - -
11 816 18,792,907 - 20,207,704 1,414,797 FANCA, SPIRE2, TCF25, MC1R, TUBB3, DEF8, DBNDD1, GAS8, URAH, CDH1, TANGO6, HAS3, CHTF8, UTP4, SNTB2, PDF, NIP7, TMED6, TERF2, CYB5B, NFAT5, NOB1, WWP2, PSMD7, ZFHX3, DHX38, DHODH, IST1, ZNF821, ATXN1L, AP1G1, PHLPP2, TAT, TERF2IP, KARS, ADAT1, GABARAPL2, CHST6, TMEM231 39
14 449 76,321 - 681,755 605,434 PDXDC1, NTAN1, RRN3, RSL1D1, GSPT2, SNX29, CPPED1 7
191 6,285,034 - 6,526,791 241,757 GNG13, CHTF18, RPUSD1, MSLN, NARFL, HAGHL, HAGH, FAHD1, MEIOB, HS3ST6, MSRB1 11
20 672 10,862,696 - 11,770,350 907,654 PRELID3B, TUBB1, CTSZ, NELFCD, GNAS, NPEPL1, STX16, APCDD1L, VAPB, RAB22A, C20orf85, PMEPA1, PCK1, RBM38, RAE1, SPO11, BMP7 17
2 12,015,574 - 12,015,807 233 CSTF1 1
1,372 12,028,923 - 14,098,905 2,069,982 FAM210B, MC3R, CBLN3, DOK5, PFDN4, BCAS1, TSHZ2, ZFP64, SALL4, ATP9A, NFATC2, KCNG1, MOCS3, DPM1, ADNP, PARD6B, RIPOR3, PTPN1, CEBPB, TMEM189, UBE2V1, SNAI1, RNF114, SPATA2, SLC9A8, B4GALT5 26
ROH, runs of homozygosity; YO, Yeonsan Ogye; Chr, chromosome; SNP, single nucleotide polymorphism.